User Guide
###################

The following pages provide a (for now) quite incomplete documentation of how to install and configure the SBART pipeline. 

.. warning::
    It is highly advised to not run SBART inside jupyter notebooks, as one might run into issues due to  terminal logging.

.. toctree::
   :maxdepth: 2
   :caption: User Guide

        Installation <user_guides/installation>
        QuickStart guide to sBART <user_guides/quickstart>
        Understanding the outputs <user_guides/SBART_outputs>
        Configuration of the parameters <user_guides/sBART_config>
        Contributing to SBART <user_guides/CONTRIBUTING>

        Release Notes <NEWS>