Index

_

__init__() (ActIndicators_Unit method) (chi_squared_sampler method) (Classical_Unit method) (Constraint method) (DefaultValues method) (InternalParameters method) (IterableMustHave method) (Laplace_approx method) (MCMC_sampler method) (RV_cube method) (RV_holder method) (RV_routine method) (SamplerModel method) (SbartBaseSampler method) (UnitModel method) (UserParam method) (ValueFromDtype method) (ValueFromIterable method) (ValueInInterval method) (WindowSampler method)

A

ActIndicators_Unit (class in SBART.DataUnits.Act_Indicator_Unit) add_extra_param() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method) add_extra_storage_unit() (RV_cube method) add_new_frame() (RV_cube method) add_relative_path() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (RV_cube method) (UnitModel method) (WindowSampler method) add_RV_cube() (RV_holder method) add_to_status() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (RV_cube method) (UnitModel method) (WindowSampler method)

AlreadyLoaded apply_approximated_BERV_correction() (in module SBART.utils.shift_spectra) apply_BERV_correction() (in module SBART.utils.shift_spectra) apply_constraints_to_value() (UserParam method) apply_epochwise() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method) apply_MCMC() (MCMC_sampler method) apply_orderskip_method() (RV_routine method) apply_orderwise() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method) apply_routine_to_subInst() (RV_routine method) apply_RVshift() (in module SBART.utils.shift_spectra) apply_to_value() (Constraint method) argument_checker() (in module SBART.utils.parameter_validators.class_decorator)

B

BadOrderError BadTemplateError

build_blocks() (in module SBART.utils.RV_utilities.create_spectral_blocks) build_datablock() (RV_cube method) build_target_configs() (RV_routine method)

C

ccffitRV() (in module SBART.utils.RV_utilities.CCF_errors) chi_squared_sampler (class in SBART.Samplers) Classical_Unit (class in SBART.DataUnits.ClassicalUnit) close_multiprocessing() (RV_routine method) close_queues() (RV_routine method) close_shared_mem_arrays() (RV_routine method) complement_orders_to_skip() (RV_routine method) compute_DLW() (in module SBART.utils.RV_utilities) compute_epochwise_combination() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (SbartBaseSampler method) (WindowSampler method) compute_outliers() (in module SBART.Quality_Control.outlier_detection) compute_SA_correction() (RV_cube method)

compute_statistics() (RV_cube method) config_help() (chi_squared_sampler class method) (Laplace_approx class method) (MCMC_sampler class method) (RV_cube class method) (UnitModel class method) (WindowSampler class method) Constraint (class in SBART.utils.UserConfigs) control_parameters() (chi_squared_sampler class method) (Laplace_approx class method) (MCMC_sampler class method) (RV_cube class method) (UnitModel class method) (WindowSampler class method) convert_data() (in module SBART.utils.units) create_extra_plots() (RV_routine method)

D

data (RV_cube property) DeadWorkerError default_value (UserParam property) DefaultValues (class in SBART.utils.UserConfigs) description (UserParam attribute) disable_memory_savings() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method) disk_save_enabled (chi_squared_sampler property) (Laplace_approx property) (MCMC_sampler property) (RV_cube property) (UnitModel property) (WindowSampler property)

disk_save_level (chi_squared_sampler property) (Laplace_approx property) (MCMC_sampler property) (RV_cube property) (UnitModel property) (WindowSampler property)

E

enable_memory_savings() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method) enable_param() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method) ensure_invalid_template() (in module SBART.utils.custom_exceptions) ensure_valid_RV() (in module SBART.utils.RV_utilities.ensure_value_in_limits)

Error evaluate() (Constraint method) (IterableMustHave method) (ValueFromDtype method) (ValueFromIterable method) (ValueInInterval method) existing_constraints (UserParam property) export_complete_rdb() (RV_cube method) export_rdb() (RV_cube method) export_results() (RV_cube method) export_skip_reasons() (RV_cube method) export_txt() (RV_cube method)

F

FailedStorage fgauss() (in module SBART.utils.RV_utilities.CCF_errors) find_index_of() (UnitModel method) find_subInstruments_to_use() (RV_routine method)

find_wavelength_limits() (in module SBART.utils.RV_utilities.clean_data) fit_continuum_level() (in module SBART.utils.RV_utilities.continuum_fit) FrameError frameIDs (RV_cube property)

G

generate_new_cube() (RV_holder method) generate_prior_of_model() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method) generate_root_path() (ActIndicators_Unit method) (chi_squared_sampler method) (Classical_Unit method) (Laplace_approx method) (MCMC_sampler method) (RV_cube method) (UnitModel method) (WindowSampler method) generate_valid_orders() (RV_routine method) generate_worker_configs() (RV_routine method) get_all_orderwise_indicator() (ActIndicators_Unit method) get_ChiSquared_frameID_information() (Classical_Unit method)

get_ChiSquared_order_information() (Classical_Unit method) get_combined_measurement_of_frame() (ActIndicators_Unit method) get_combined_measurements() (ActIndicators_Unit method) get_frame_orderwise_status() (RV_cube method) get_orders_to_skip() (RV_holder method) get_orderwise_measurement_of_frame() (ActIndicators_Unit method) get_raw_DRS_RVs() (RV_cube method) get_raw_TM_RVs() (RV_cube method) get_RV_cube() (RV_holder method) get_RV_from_ID() (RV_cube method) get_RV_timeseries() (RV_cube method) get_storage_filename() (ActIndicators_Unit method) (Classical_Unit method) get_storage_unit() (RV_cube method) get_stored_subInsts() (RV_holder method) get_terminal_output() (UserParam method) get_TM_activity_indicator() (RV_cube method) get_user_configs() (InternalParameters method)

H

has_data_from_subInst() (RV_cube method)

I

ingest_cube_into_rolling_skip_reasons() (RV_holder method) ingest_dataClass_from_rolling() (RV_cube method) (RV_holder method) InternalError InternalParameters (class in SBART.utils.UserConfigs) InvalidConfiguration is_mandatory (UserParam property) is_object_type() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (RV_cube method) (UnitModel method) (WindowSampler method) is_sampler() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method)

is_storage_type() (UnitModel method) is_valid (chi_squared_sampler property) (Laplace_approx property) (MCMC_sampler property) (RV_cube property) (UnitModel property) (WindowSampler property) items() (DefaultValues method) (InternalParameters method) IterableMustHave (class in SBART.utils.UserConfigs)

J

json_ready() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (RV_cube method) (UnitModel method) (WindowSampler method)

K

keys() (DefaultValues method)

kill_workers() (RV_routine method)

L

Laplace_approx (class in SBART.Samplers) launch_wavelength_selection() (RV_routine method) launch_workers() (RV_routine method) load_cube_from_disk() (RV_cube class method) load_data_from() (RV_cube method) load_data_from_DataClass() (RV_cube method) load_from_disk() (ActIndicators_Unit class method) (Classical_Unit class method) (RV_holder class method) (UnitModel class method) load_from_file() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (RV_cube method) (UnitModel method) (WindowSampler method)

load_previous_RVoutputs() (RV_routine method) lock_model_param() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method)

M

manage_RV_calculation() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method) match_continuum_levels() (in module SBART.utils.RV_utilities.continuum_fit) MCMC_sampler (class in SBART.Samplers) merge_tm_activity_units() (RV_cube method) merge_with() (ActIndicators_Unit method) (UnitModel method) MissingRootPath module SBART.Base_Models SBART.Base_Models.RV_routine SBART.Base_Models.Sampler_Model SBART.Components SBART.data_objects SBART.data_objects.RV_outputs SBART.DataUnits SBART.DataUnits.Act_Indicator_Unit SBART.DataUnits.ClassicalUnit SBART.Quality_Control, [1] SBART.Quality_Control.outlier_detection SBART.Samplers SBART.Samplers.SbartBaseSampler SBART.utils SBART.utils.custom_exceptions SBART.utils.parameter_validators SBART.utils.parameter_validators.class_decorator SBART.utils.RV_utilities SBART.utils.RV_utilities.CCF_errors SBART.utils.RV_utilities.clean_data SBART.utils.RV_utilities.continuum_fit SBART.utils.RV_utilities.create_spectral_blocks SBART.utils.RV_utilities.ensure_value_in_limits SBART.utils.RV_utilities.orderwiseRVcombination SBART.utils.shift_spectra SBART.utils.units SBART.utils.UserConfigs

N

N_model_params (chi_squared_sampler property) (Laplace_approx property) (MCMC_sampler property) (SamplerModel property) (WindowSampler property) N_obs (RV_cube property) N_orders (RV_cube property) name (chi_squared_sampler property) (Laplace_approx property) (MCMC_sampler property) (RV_cube property) (UnitModel property) (WindowSampler property)

no_logs (InternalParameters attribute) NoComputedRVsError NoConvergenceError NoDataError

O

obs_times (RV_cube property) open_queues() (RV_routine method) optimize() (Laplace_approx method) (MCMC_sampler method) (SbartBaseSampler method) optimize_epochwise() (Laplace_approx method) (MCMC_sampler method) (SbartBaseSampler method) (WindowSampler method)

optimize_orderwise() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (SbartBaseSampler method) (WindowSampler method) orderwise_combination() (in module SBART.utils.RV_utilities.orderwiseRVcombination) overwrite_existing_frame() (RV_cube method)

P

plot_ChiSquared() (Classical_Unit method) plot_RVs() (RV_cube method) polynomial_continuum_model() (in module SBART.utils.RV_utilities.continuum_fit) problematic_orders (RV_cube property) process_epochwise_metrics() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (SbartBaseSampler method) (WindowSampler method)

process_orders_to_skip_from_user() (RV_routine method) process_posterior() (Laplace_approx method) process_workers_output() (RV_routine method)

Q

quiet (UserParam attribute)

quiet_output (UserParam property)

R

receive_user_inputs() (InternalParameters method) remove_approximated_BERV_correction() (in module SBART.utils.shift_spectra) remove_BERV_correction() (in module SBART.utils.shift_spectra) remove_RVshift() (in module SBART.utils.shift_spectra) remove_subInstrument_data() (RV_holder method) run_cromatic_interval_optimization() (RV_cube method) run_routine() (RV_routine method) RV_cube (class in SBART.data_objects)

RV_holder (class in SBART.data_objects.RV_outputs) RV_keyword (chi_squared_sampler property) (Laplace_approx property) (MCMC_sampler property) (SamplerModel property) (WindowSampler property) RV_routine (class in SBART.Base_Models.RV_routine) RVerror() (in module SBART.utils.RV_utilities.CCF_errors)

S

sampler_name (RV_routine attribute) SamplerModel (class in SBART.Base_Models.Sampler_Model) SBART.Base_Models module SBART.Base_Models.RV_routine module SBART.Base_Models.Sampler_Model module SBART.Components module SBART.data_objects module SBART.data_objects.RV_outputs module SBART.DataUnits module SBART.DataUnits.Act_Indicator_Unit module SBART.DataUnits.ClassicalUnit module SBART.Quality_Control module, [1] SBART.Quality_Control.outlier_detection module SBART.Samplers module SBART.Samplers.SbartBaseSampler module SBART.utils module SBART.utils.custom_exceptions module SBART.utils.parameter_validators module SBART.utils.parameter_validators.class_decorator module SBART.utils.RV_utilities module SBART.utils.RV_utilities.CCF_errors module SBART.utils.RV_utilities.clean_data module SBART.utils.RV_utilities.continuum_fit module SBART.utils.RV_utilities.create_spectral_blocks module

SBART.utils.RV_utilities.ensure_value_in_limits module SBART.utils.RV_utilities.orderwiseRVcombination module SBART.utils.shift_spectra module SBART.utils.units module SBART.utils.UserConfigs module SbartBaseSampler (class in SBART.Samplers.SbartBaseSampler) select_wavelength_regions() (RV_routine method) set_merged_mode() (RV_cube method) set_mode() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method) show_posterior() (Laplace_approx method) (MCMC_sampler method) (SbartBaseSampler method) StopComputationError storage_name (chi_squared_sampler property) (Laplace_approx property) (MCMC_sampler property) (RV_cube property) (UnitModel property) (WindowSampler property) store_ChiSquared() (Classical_Unit method) store_combined_indicators() (ActIndicators_Unit method) store_complete_timeseries() (RV_holder method) store_computed_RVs_to_disk() (RV_holder method) store_final_RV() (RV_cube method) store_metrics() (MCMC_sampler method) store_order_data() (RV_cube method) store_orderwise_indicators() (ActIndicators_Unit method) store_shared_buffer() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (SamplerModel method) (WindowSampler method) stretch_continuum_nodel() (in module SBART.utils.RV_utilities.continuum_fit) subInst (RV_cube property) subInstruments_to_use (RV_routine property)

T

TemplateNotExistsError text_pretty_description() (InternalParameters method) time_key (RV_cube property) trigger_data_storage() (ActIndicators_Unit method) (chi_squared_sampler method) (Classical_Unit method) (Laplace_approx method) (MCMC_sampler method) (RV_cube method) (RV_holder method) (RV_routine method) (UnitModel method) (WindowSampler method)

U

UnitModel (class in SBART.Base_Models) update() (DefaultValues method) update_computed_precision() (RV_cube method) update_computed_RVS() (RV_cube method) update_configs_with_values() (InternalParameters method) update_disk_saving_level() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (RV_cube method) (UnitModel method) (WindowSampler method)

update_output_keys() (RV_holder method) update_skip_reason() (RV_cube method) update_work_mode_level() (chi_squared_sampler method) (Laplace_approx method) (MCMC_sampler method) (RV_cube method) (RV_holder method) (UnitModel method) (WindowSampler method) update_worker_information() (RV_cube method) UserParam (class in SBART.utils.UserConfigs)

V

validator() (in module SBART.utils.parameter_validators.class_decorator) ValueFromDtype (class in SBART.utils.UserConfigs)

ValueFromIterable (class in SBART.utils.UserConfigs) ValueInInterval (class in SBART.utils.UserConfigs) values() (DefaultValues method)

W

WindowSampler (class in SBART.Samplers) work_mode (chi_squared_sampler property) (Laplace_approx property) (MCMC_sampler property) (RV_cube property) (UnitModel property) (WindowSampler property)